Possible mechanisms contributing to oxidative inactivation of activated protein C: Molecular dynamics study

Journal:Thrombosis and Haemostasis
ISSN:0340-6245
DOI:http://dx.doi.org/10.1160/TH07-12-0750
Issue:2008: 100/1 (July) pp. 1-171
Pages:18-25

Possible mechanisms contributing to oxidative inactivation of activated protein C: Molecular dynamics study

Armen Nalian, Alexei V. Iakhiaev
1Department of Biotechnology, Stephen F. Austin State University, Nacogdoches, Texas, USA; 2Texas College, Tyler, Texas, USA

Summary

Activated protein C (APC) is a serine protease, an effector enzyme of the natural anticoagulant pathway. APC is approved for treatment of severe sepsis characterized by the increased concentrations of H2O2 and hypochlorite.We found that treatment of APC with these oxidants markedly inhibits the cleavage of the APC-specific chromogenic substrate, suggesting that oxidants can induce changes in the structure of the active site of APC. Resistance of oxidant-treated APC to chemical digestion with cyanogen bromide (CNBr) implies that methionine oxidation can at least in part be responsible for inhibition of APC. Since methionine residues, the main targets of oxidants in APC, are not included in the active site, we hypothesize that oxidation induces allosteric changes in the architecture of the catalytic triad of APC. Using molecular dynamics (MD) simulations we found that methionine oxidation alters the distance between cSer195Oγ and cHis57 Nε2 atoms placing them in positions unfavorable for the catalysis. At the same time, neither distances between Cα atoms of the catalytic triad cAsp102-cHis57- cSer195, nor the overall structure of APC changed significantly after oxidation of the methionine residues. Disruption of the H-bond between Nδ1 of cHis57 and carboxyl group of cAsp102, which can take place during the hypochlorite-induced modification of cHis57,dramatically changed the architecture of the catalytic triad in oxidized APC.This mechanism could contribute to APC inactivation by hypochlorite concurrently with methionine oxidation. These are novel findings, which describe potentially pathophysiologically relevant changes in the functional stability of APC exposed to the oxidative stress.

Keywords

protein function / activity, Gla-domain proteins, oxidative stress

DOI

http://dx.doi.org/10.1160/TH07-12-0750

You may also be interested in...

1.

Jean E. Grundy1, Mark A. Hancock2, Scott C. Meixner1, Roger C. MacKenzie3, Marlys L. Koschinsky2, Edward L. G. Pryzdial1

Thrombosis and Haemostasis 2007 97 1: 38-44

http://dx.doi.org/10.1160/TH06-08-0476

2.

St. Engeli

Adipositas 2007 1 2: 74-78

3.

Talija Djordjevic, Agnes Görlach

Thrombosis and Haemostasis 2007 98 5: 952-962

http://dx.doi.org/10.1160/TH07-04-0294



Articles

You've 332 Article(s) in your Basket.

TH 107.5

Clinical Focus on GPIIb/IIIa inhibitors: In the May issue of Thrombosis and Haemostasis Armstrong...

TH 107.4

The April 2012 issue of Thrombosis and Haemostasis TH 107.4 is a Theme Issue by A. Schober, T....

Thrombosis and Haemostasis official organ of Spanish Society for Thrombosis and Haemostasis

Thrombosis and Haemostasis, founded in 1957, has become the official organ of the Spanish Society...